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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815452.1_cds_XP_016498325.1_12366
CDS Infomation

[gene=LOC107817062] [db_xref=GeneID:107817062] [protein=light-mediated development protein DET1 isoform X2] [protein_id=XP_016498325.1] [location=join(78886..78941,80164..80274,80385..80591,80696..80924,81842..81979,84597..84665,84827..84883,85561..85641,85719..85883,86237..86332,89249..89348,89471..89610)] [gbkey=CDS]
Sequence

ATGTTACCGCCAGGCTTTTTGAGCGCCAGATTTGTACCCCTTCTCCAGGCACCAGTATTC
ATCGTGCCAGAAGATTTTATGAGAACATTGTACCAAGTTATACCGTATATGATGTTGAAT
GTCCCGACCATTCATTTCGCAAGTTCACGGATGATGGTCTATATCTTGAAGTTCGAGAGC
TTCTTCACGCAACTGTACAGTGTAACTCTTGCTTCTAGTGGGGAACTTATATGCAAGGAT
TTCTTTCTCTATATGGAGAGCAATCAATTTGGACTCTTTGCAACTTCAACTGCACAAATT
CATGATGCTCCTCCTACAGGAGGGGCAATTCAGGGTGTCCCTTCAGTTGAAAAAATAACT
TTCCACCTTCTGAGGTTGGAGGATGGAGCTATACTTGACGAGAGGGTTTTTCACAATGAT
TATGTTAATTTGGCACATAGTGTTGGTGCTTTCTTGTATGATGATTTGCTTGCTATAGTG
TCCCTTCGTTTTCAAAGAATACACATCCTTCAGATCAGAGATTCTGGAGATCTTGTTGAT
GTACGAGCAATTGGGGAATTCTGCCGTGAAGATGATGAGCTTTTTCTCAATTCCAATTCC
CAGGTGCTTGTAAATCATGTTGGAAATGGTTTTCATCATGGTCTGCCTGATCCAGAGACT
TCTTTCCTGAGTGGTATAAAGCAGCGGCTGCTTTCATTTATATTTCGAGGTATATGGAAT
GAAGAAACTGACCAGACCATGCGAGTGCAGTGCCTGAAGAAGAAGTTTTACTTCCACTTT
CAAGATTACATTGACTTGATTATCTGGAAGGTACAATTTTTGGACCGACATCACCTATTG
ATCAAGTTTGGCAGTGTTGATGGTGGGGTATCTCGAAATGCTGACAGCCATCCTTCCTTT
TTTGCTGTTTATAATATGGAGACTACTGACATTGTTGCATTTTATCAGAACTCAGCCGAT
GAGCTCTATTTCTTGTTCGAGCTGTTCAGTGACCACTTTCATGTTTCATCCAGAAGTTCA
TTACATATGAACTTCATGTCCTCTCATTCAAACAACATCCACGCCCTCGAGCAACTAAGG
TGCACAAAGAATAAAGCAACCAGTTTTCCTCAATTTGTTAAGAAGATGATGGCCTCCTTG
CCTTTTAGTTGTCAGTCTCAGAGCCCTTCCCCTTATTTTGACCAGTCTTTCTTCAGATTT
GATGAGAAGCTTATTTCAGCGATTGACCGCCATAGACAGTCTACTGACCATCCAATCAAA
TTCATTTCAAGGAGACAACCTAATATCCTGAAATTCAAAATTAAGCCAGGACCCGAAGCC
GGCAGCACGGATGGGCGGACTAAGAAGATCTGTTCCTTCCTCTTCCACCCAATATTACCC
CTTGCAATTTCTGTTCAACAAACCTTGTTTCTGCAGGCATCAGTTGTAAATATCCATTTT
CGTCGGTAA

Peptide Sequence

PEP ID

XP_016498325.1
PEP Infomation

PREDICTED: light-mediated development protein DET1 isoform X2 [Nicotiana tabacum]
Sequence

MLPPGFLSARFVPLLQAPVFIVPEDFMRTLYQVIPYMMLNVPTIHFASSRMMVYILKFES
FFTQLYSVTLASSGELICKDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKIT
FHLLRLEDGAILDERVFHNDYVNLAHSVGAFLYDDLLAIVSLRFQRIHILQIRDSGDLVD
VRAIGEFCREDDELFLNSNSQVLVNHVGNGFHHGLPDPETSFLSGIKQRLLSFIFRGIWN
EETDQTMRVQCLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADSHPSF
FAVYNMETTDIVAFYQNSADELYFLFELFSDHFHVSSRSSLHMNFMSSHSNNIHALEQLR
CTKNKATSFPQFVKKMMASLPFSCQSQSPSPYFDQSFFRFDEKLISAIDRHRQSTDHPIK
FISRRQPNILKFKIKPGPEAGSTDGRTKKICSFLFHPILPLAISVQQTLFLQASVVNIHF
RR

Transcript Sequence

Gene sequence data has not been registered.